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minimum spanning trees generated in bionumerics software v.7.6  (Applied Maths)

 
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    Applied Maths minimum spanning trees generated in bionumerics software v.7.6
    Minimum Spanning Trees Generated In Bionumerics Software V.7.6, supplied by Applied Maths, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/software+bionumerics+v+7%2E6/minimum+spanning+tree+bionumerics+version+6+6/pm40430727-85-15-18
    Average 90 stars, based on 1 article reviews
    minimum spanning trees generated in bionumerics software v.7.6 - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: High Temperatures and Bacillus Inoculation Affect the Diversity of Bradyrhizobia in Cowpea Root Nodules.
    Article Snippet: PCR products were subjected to horizontal electrophoresis using 1.25% (w v‐1) agarose gel at 90 V for 3 h. All the BOX‐PCR profiles were clustered in a similarity dendrogram using the software BioNumerics v 7.6 (Applied Maths, Belgium), applying the UPGMA method and the Dice coefficient.

    Electrophoresis:

    Article Title: High Temperatures and Bacillus Inoculation Affect the Diversity of Bradyrhizobia in Cowpea Root Nodules.
    Article Snippet: PCR products were subjected to horizontal electrophoresis using 1.25% (w v‐1) agarose gel at 90 V for 3 h. All the BOX‐PCR profiles were clustered in a similarity dendrogram using the software BioNumerics v 7.6 (Applied Maths, Belgium), applying the UPGMA method and the Dice coefficient.

    Agarose Gel Electrophoresis:

    Article Title: High Temperatures and Bacillus Inoculation Affect the Diversity of Bradyrhizobia in Cowpea Root Nodules.
    Article Snippet: PCR products were subjected to horizontal electrophoresis using 1.25% (w v‐1) agarose gel at 90 V for 3 h. All the BOX‐PCR profiles were clustered in a similarity dendrogram using the software BioNumerics v 7.6 (Applied Maths, Belgium), applying the UPGMA method and the Dice coefficient.

    Software:

    Article Title: High Temperatures and Bacillus Inoculation Affect the Diversity of Bradyrhizobia in Cowpea Root Nodules.
    Article Snippet: PCR products were subjected to horizontal electrophoresis using 1.25% (w v‐1) agarose gel at 90 V for 3 h. All the BOX‐PCR profiles were clustered in a similarity dendrogram using the software BioNumerics v 7.6 (Applied Maths, Belgium), applying the UPGMA method and the Dice coefficient.



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    The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 S. schenckii (reference strains), 6 S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in <t>BioNumerics</t> software v7.6.
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    bionumerics software v.7.6  (Applied Maths)
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    Applied Maths bionumerics software v.7.6
    The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 S. schenckii (reference strains), 6 S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in <t>BioNumerics</t> software v7.6.
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    https://www.bioz.com/product/software+bionumerics+v+7%2E6/bionumerics+software/10__3390_slash_jof10120848-76-6-9
    Average 90 stars, based on 1 article reviews
    bionumerics software v.7.6 - by Bioz Stars, 2026-09
    90/100 stars
    		  Buy from Supplier

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    The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 S. schenckii (reference strains), 6 S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in BioNumerics software v7.6.

    Journal: Journal of Fungi

    Article Title: Analyses of the Genetic Diversity and Population Structures of Sporothrix spp. Clinical Isolates from Paraíba, Brazil

    doi: 10.3390/jof10120848

    Figure Lengend Snippet: The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 S. schenckii (reference strains), 6 S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in BioNumerics software v7.6.

    Article Snippet: Fragment analysis was performed using the BioNumerics software. v.7.6 (Applied Maths, Sint-Martens-Latem, Belgium).

    Techniques: Generated, Construct, Software

    The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 of S. schenckii (reference strains), 6 of S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in BioNumerics software v7.6.

    Journal: Journal of Fungi

    Article Title: Analyses of the Genetic Diversity and Population Structures of Sporothrix spp. Clinical Isolates from Paraíba, Brazil

    doi: 10.3390/jof10120848

    Figure Lengend Snippet: The dendrogram depicts the cluster profile generated by the AFLP method. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 of S. schenckii (reference strains), 6 of S. globosa (reference strains). The dendrograms were constructed using the Jaccard similarity coefficient and UPGMA clustering algorithm in BioNumerics software v7.6.

    Article Snippet: Fragment analysis was performed using the BioNumerics software. v.7.6 (Applied Maths, Sint-Martens-Latem, Belgium).

    Techniques: Generated, Construct, Software

    Minimum Spanning Tree (MST) derived from AFLP data. ( A ) In the #3 EcoRI-GA/MseI-TT combination and ( B ) In the #5 EcoRI-GA/MseI-AG combination. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 of S. schenckii (reference strains), 6 of S. globosa (reference strains). The dotted lines represent the cluster profile obtained by the AFLP method of S. brasiliensis isolates from Paraíba. * Isolates from Paraíba. The analysis was performed using the BioNumerics software v7.6.

    Journal: Journal of Fungi

    Article Title: Analyses of the Genetic Diversity and Population Structures of Sporothrix spp. Clinical Isolates from Paraíba, Brazil

    doi: 10.3390/jof10120848

    Figure Lengend Snippet: Minimum Spanning Tree (MST) derived from AFLP data. ( A ) In the #3 EcoRI-GA/MseI-TT combination and ( B ) In the #5 EcoRI-GA/MseI-AG combination. The dataset consisted of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and 8 reference strains), 6 of S. schenckii (reference strains), 6 of S. globosa (reference strains). The dotted lines represent the cluster profile obtained by the AFLP method of S. brasiliensis isolates from Paraíba. * Isolates from Paraíba. The analysis was performed using the BioNumerics software v7.6.

    Article Snippet: Fragment analysis was performed using the BioNumerics software. v.7.6 (Applied Maths, Sint-Martens-Latem, Belgium).

    Techniques: Derivative Assay, Software

    Principal component analysis (PCA) and multidimensional scaling (MDS). ( A , B ) In the #3 EcoRI-GA/MseI-TT combination and ( C , D ) In the #5 EcoRI-GA/MseI-AG combination The dataset consists of 46 isolates of S. brasiliensis (38 clinical isolates from Paraíba and eight reference strains), six of S. schenckii (reference strains), six of S. globosa (reference strains). The isolates were plotted in three-dimensional space and coloured according to genetic groups. The dotted lines represent the cluster profile obtained by the AFLP method of S. brasiliensis isolates from Paraíba. The analysis was performed using the BioNumerics software v7.6.

    Journal: Journal of Fungi

    Article Title: Analyses of the Genetic Diversity and Population Structures of Sporothrix spp. Clinical Isolates from Paraíba, Brazil

    doi: 10.3390/jof10120848

    Figure Lengend Snippet: Principal component analysis (PCA) and multidimensional scaling (MDS). ( A , B ) In the #3 EcoRI-GA/MseI-TT combination and ( C , D ) In the #5 EcoRI-GA/MseI-AG combination The dataset consists of 46 isolates of S. brasiliensis (38 clinical isolates from Paraíba and eight reference strains), six of S. schenckii (reference strains), six of S. globosa (reference strains). The isolates were plotted in three-dimensional space and coloured according to genetic groups. The dotted lines represent the cluster profile obtained by the AFLP method of S. brasiliensis isolates from Paraíba. The analysis was performed using the BioNumerics software v7.6.

    Article Snippet: Fragment analysis was performed using the BioNumerics software. v.7.6 (Applied Maths, Sint-Martens-Latem, Belgium).

    Techniques: Software

    Distribution of Sporothrix spp. Genotypes generated by AFLP using a Self-Organizing Map (SOM). Kohonen maps using characters. ( A ) In the #3 EcoRI-GA/MseI-TT combination and ( B ) In the #5 EcoRI-GA/MseI-AG combination A total of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and eight reference strains), six of S. schenckii (reference strains) and six of S. globosa (reference strains) were included in this study. The dimensioning analyses were performed using BioNumerics v7.6 to assess the consistency of the differentiation of the populations defined by the cluster analysis. The distance between black blocks can be inferred by observing the thickness and brightness of the lines (white, grey) connecting them. The thicker and lighter the line, the greater the distance between the samples in the black blocks and their neighbouring blocks. Isolates were assigned specific colours corresponding to their genetic groups.

    Journal: Journal of Fungi

    Article Title: Analyses of the Genetic Diversity and Population Structures of Sporothrix spp. Clinical Isolates from Paraíba, Brazil

    doi: 10.3390/jof10120848

    Figure Lengend Snippet: Distribution of Sporothrix spp. Genotypes generated by AFLP using a Self-Organizing Map (SOM). Kohonen maps using characters. ( A ) In the #3 EcoRI-GA/MseI-TT combination and ( B ) In the #5 EcoRI-GA/MseI-AG combination A total of 46 S. brasiliensis isolates (38 clinical isolates from Paraíba and eight reference strains), six of S. schenckii (reference strains) and six of S. globosa (reference strains) were included in this study. The dimensioning analyses were performed using BioNumerics v7.6 to assess the consistency of the differentiation of the populations defined by the cluster analysis. The distance between black blocks can be inferred by observing the thickness and brightness of the lines (white, grey) connecting them. The thicker and lighter the line, the greater the distance between the samples in the black blocks and their neighbouring blocks. Isolates were assigned specific colours corresponding to their genetic groups.

    Article Snippet: Fragment analysis was performed using the BioNumerics software. v.7.6 (Applied Maths, Sint-Martens-Latem, Belgium).

    Techniques: Generated